Shiny App to Explore Single Cell RNAseq Tissues

An open-source application interface available to perform gene expression query, differential gene expression and cell type population comparisons across pig primary and secondary lymphoid organs.

The app functionalities include:

• Home Page: Includes ready-to-use and preprocessed .cloupe files, and cell-type-specific differential gene expression analysis.
• Gene Expression Page: Visualize expression of selected or typed-in genes across tissues using cell annotations, UMAP, and violin plots.
• Reference Mapping Page: Compare immune cell types from the reference (Bone Marrow) to predicted cell types in other tissues.

For more information, visit the FAANG official website